Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PEX3Peroxisomal biogenesis factor 3. (373 aa)    
Predicted Functional Partners:
PEX19
Peroxisomal biogenesis factor 19.
   
 0.999
PEX16
Peroxisomal membrane protein PEX16.
   
 0.994
PEX12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 0.993
PEX13
SH3 domain-containing protein.
   
 0.990
PEX11B
Peroxisomal biogenesis factor 11 beta.
   
 0.982
PEX14
Peroxisomal biogenesis factor 14.
   
 0.981
ABCD3
ATP binding cassette subfamily D member 3.
   
 0.945
PXMP2
Peroxisomal membrane protein 2; Belongs to the peroxisomal membrane protein PXMP2/4 family.
   
 
 0.920
FAM185A
Family with sequence similarity 185 member A.
   
 0.908
PEX10
Peroxisomal biogenesis factor 10.
   
  
 0.907
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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