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AP5B1 protein (Latimeria chalumnae) - STRING interaction network
"AP5B1" - Adaptor-related protein complex 5, beta 1 subunit in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AP5B1Adaptor-related protein complex 5, beta 1 subunit (928 aa)    
Predicted Functional Partners:
AP5S1
Adaptor-related protein complex 5, sigma 1 subunit (202 aa)
     
 
  0.649
AP5Z1
Adaptor-related protein complex 5, zeta 1 subunit (809 aa)
     
   
  0.641
ZFYVE26
Zinc finger, FYVE domain containing 26 (2567 aa)
     
   
  0.590
SPG11
Spastic paraplegia 11 (autosomal recessive) (2438 aa)
     
   
  0.584
PORCN
Porcupine homolog (Drosophila) (463 aa)
           
  0.428
TMEM161A
Transmembrane protein 161A (482 aa)
     
   
  0.416
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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