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UBXN2A protein (Latimeria chalumnae) - STRING interaction network
"UBXN2A" - UBX domain protein 2A in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBXN2AUBX domain protein 2A (254 aa)    
Predicted Functional Partners:
UBXN6
UBX domain protein 6 (439 aa)
     
 
  0.911
ASPSCR1
ASPSCR1, UBX domain containing tether for SLC2A4; Alveolar soft part sarcoma chromosome region, candidate 1 (597 aa)
       
 
  0.898
UBXN7
UBX domain protein 7 (505 aa)
     
 
  0.867
VCP
Valosin containing protein (801 aa)
     
 
  0.842
NPLOC4
NPL4 homolog, ubiquitin recognition factor; Nuclear protein localization 4 homolog (S. cerevisiae) (612 aa)
     
 
  0.810
UBXN10
UBX domain protein 10 (303 aa)
       
 
  0.806
UBXN11
UBX domain protein 11 (533 aa)
           
  0.795
KCTD10
Potassium channel tetramerization domain containing 10 (318 aa)
     
   
  0.780
UFD1L
Ubiquitin fusion degradation 1 like (yeast) (302 aa)
     
 
  0.709
FAF2
Fas associated factor family member 2 (445 aa)
     
 
  0.697
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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