Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADAMTS18ADAM metallopeptidase with thrombospondin type 1 motif 18. (1173 aa)    
Predicted Functional Partners:
GPR84
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.930
HIVEP3
Human immunodeficiency virus type I enhancer binding protein 3.
      
 0.930
SALL4
Spalt like transcription factor 4.
   
  
 0.906
USH1C
USH1 protein network component harmonin.
      
 0.792
SELENOS
Selenoprotein S.
      
 0.792
FBN1
Fibrillin 1.
    
 0.775
IRX3
Iroquois homeobox 3.
      
 0.725
THSD1
Thrombospondin type 1 domain containing 1.
     
 0.681
SCUBE3
Signal peptide, CUB domain and EGF like domain containing 3.
   
 0.672
SCUBE2
Signal peptide, CUB domain and EGF like domain containing 2.
   
 0.672
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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