STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP5Tartrate-resistant acid phosphatase type 5. (329 aa)    
Predicted Functional Partners:
ACP2
Acid phosphatase 2, lysosomal; Belongs to the histidine acid phosphatase family.
   
 
 0.936
ACP1
LMWPc domain-containing protein.
    
 0.925
RFK
Riboflavin kinase.
  
 
 0.916
BLVRB
Biliverdin reductase B.
     
  0.909
ENPP3
Ectonucleotide pyrophosphatase/phosphodiesterase 3.
    
 0.903
ENPP1
Ectonucleotide pyrophosphatase/phosphodiesterase 1.
    
 0.903
FLAD1
Flavin adenine dinucleotide synthetase 1.
    
  0.902
LCAT
Lecithin-cholesterol acyltransferase.
      
 0.889
TNFSF11
TNF superfamily member 11; Belongs to the tumor necrosis factor family.
      
 0.881
CYTB
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.
      
 0.812
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.