STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACP5Tartrate-resistant acid phosphatase type 5. (329 aa)    
Predicted Functional Partners:
ACP1
LMWPc domain-containing protein.
    
 0.940
RFK
Riboflavin kinase.
  
 
 0.922
ACP2
Acid phosphatase 2, lysosomal; Belongs to the histidine acid phosphatase family.
   
 
 0.919
BLVRB
Biliverdin reductase B.
     
 0.915
FLAD1
Flavin adenine dinucleotide synthetase 1.
    
  0.902
NUDT12
Nudix hydrolase 12.
   
 0.803
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.781
CYTB
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.
      
 0.692
LCAT
Lecithin-cholesterol acyltransferase.
      
 0.686
TNFSF11
TNF superfamily member 11; Belongs to the tumor necrosis factor family.
      
 0.685
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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