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ZCCHC6 protein (Latimeria chalumnae) - STRING interaction network
"ZCCHC6" - Zinc finger, CCHC domain containing 6 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZCCHC6Zinc finger, CCHC domain containing 6 (1545 aa)    
Predicted Functional Partners:
SKIV2L2
Superkiller viralicidic activity 2-like 2 (S. cerevisiae) (1031 aa)
     
 
  0.667
HELZ2
Helicase with zinc finger 2, transcriptional coactivator (2883 aa)
     
 
  0.654
XRN1
5’-3’ exoribonuclease 1 (1737 aa)
     
 
  0.648
PAPOLA
Uncharacterized protein (735 aa)
     
 
  0.619
PAPOLG
poly(A) polymerase gamma (743 aa)
     
 
  0.619
XRN2
5’-3’ exoribonuclease 2 (921 aa)
     
 
  0.532
SCAF8
SR-related CTD-associated factor 8 (1071 aa)
     
 
  0.487
ENSLACG00000017399
Uncharacterized protein (1249 aa)
     
 
  0.461
SKIV2L
SKI2 homolog, superkiller viralicidic activity 2-like (1175 aa)
     
 
  0.461
EXOSC10
Exosome component 10 (910 aa)
     
 
  0.460
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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