STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUT7Terminal uridylyl transferase 7. (1545 aa)    
Predicted Functional Partners:
TUT4
Terminal uridylyl transferase 4.
  
0.973
LIN28A
Lin-28 homolog A.
    
 0.955
DIS3L2
DIS3 like 3'-5' exoribonuclease 2.
   
 
 0.705
RPL3
Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
   0.683
PAPOLG
Poly(A) polymerase gamma.
   
 
 0.654
LIN28B
Lin-28 homolog B.
    
 0.613
TENT4B
Terminal nucleotidyltransferase 4B.
   
  
0.602
PAPOLA
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 
 0.593
GAS1
Growth arrest specific 1.
      
 0.588
SYMPK
Symplekin.
   
 0.585
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.