STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZWS3_LATCHDBF4-type domain-containing protein. (385 aa)    
Predicted Functional Partners:
LGI2
Leucine rich repeat LGI family member 2.
     
 0.667
LGI1
Leucine rich glioma inactivated 1.
     
 0.548
SENP6
SUMO specific peptidase 6.
    
   0.538
LGI3
Leucine rich repeat LGI family member 3.
     
 0.499
LOC102349972
Uncharacterized protein.
   
 0.429
NHLRC1
NHL repeat containing E3 ubiquitin protein ligase 1.
      
 0.429
DLG2
Guanylate kinase-like domain-containing protein.
   
 0.429
DLG4
Discs large MAGUK scaffold protein 4; Belongs to the MAGUK family.
   
 0.429
DLG1
Discs large MAGUK scaffold protein 1; Belongs to the MAGUK family.
   
 0.429
DLG3
Discs large MAGUK scaffold protein 3; Belongs to the MAGUK family.
   
 0.429
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.