STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LPCAT3Lysophosphatidylcholine acyltransferase 3; Belongs to the membrane-bound acyltransferase family. (430 aa)    
Predicted Functional Partners:
MACROH2A1
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.
      
 0.571
AASDH
Aminoadipate-semialdehyde dehydrogenase.
      
 0.566
ABHD5
Abhydrolase domain containing 5.
      
 0.561
ACSL4
Acyl-CoA synthetase long chain family member 4.
      
 0.558
ZBTB21
Zinc finger and BTB domain containing 21.
      
 0.554
TRARG1
Trafficking regulator of GLUT4 (SLC2A4) 1.
      
 0.548
TMEM41B
Transmembrane protein 41B.
   
  
 0.547
FDFT1
Farnesyl-diphosphate farnesyltransferase 1.
      
 0.542
H3AC79_LATCH
PID domain-containing protein.
      
 0.525
DGAT2
Diacylglycerol O-acyltransferase 2.
      
 0.500
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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