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U2AF2 protein (Latimeria chalumnae) - STRING interaction network
"U2AF2" - U2 snRNP auxiliary factor large subunit in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U2AF2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA (367 aa)    
Predicted Functional Partners:
U2AF1
U2(RNU2) small nuclear RNA auxiliary factor 1 (192 aa)
     
  0.996
HNRNPM
Heterogeneous nuclear ribonucleoprotein M (620 aa)
     
 
  0.989
SF1
Splicing factor 1 (547 aa)
     
 
  0.986
PRPF40B
PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae) (894 aa)
     
 
  0.964
PRPF40A
PRP40 pre-mRNA processing factor 40 homolog A (yeast) (902 aa)
     
 
  0.964
CDC5L
Cell division cycle 5-like (803 aa)
     
 
  0.951
SF3A2
Splicing factor 3a, subunit 2, 66kDa (313 aa)
     
 
  0.950
SF3B1
Splicing factor 3b, subunit 1, 155kDa (1308 aa)
     
 
  0.940
ALYREF
Aly/REF export factor (258 aa)
     
 
  0.939
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide 16.5kDa (108 aa)
     
 
  0.936
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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