STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102350602Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (204 aa)    
Predicted Functional Partners:
WDR90
WD repeat domain 90.
    
 
 0.602
DNALI1
Dynein axonemal light intermediate chain 1.
    
 
 0.599
FBXO16
F-box protein 16.
    
 
 0.500
FAM166A
Uncharacterized protein.
   
 
 0.498
MAPK9
Mitogen-activated protein kinase.
    
 0.477
MRM1
Mitochondrial rRNA methyltransferase 1.
   
  
 0.471
SPACA9
Sperm acrosome associated 9.
    
 
 0.459
EFHB
EF-hand domain family member B.
   
 
 0.456
TEX49
Testis expressed 49.
    
 
 0.455
ENKUR
Enkurin, TRPC channel interacting protein.
    
 
 0.453
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.