Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBQLN1Ubiquilin 1. (526 aa)    
Predicted Functional Partners:
UBQLN4
Ubiquilin 4.
  
0.978
RPS27A
Ribosomal protein S27a.
    
  0.912
TRIP12
Thyroid hormone receptor interactor 12.
    
 0.908
LOC102350907
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.886
KXD1
Ubiquitin-like domain-containing protein.
   
 0.886
UBXN7
UBX domain-containing protein 7.
    
 0.885
PSMD14
Proteasome 26S subunit, non-ATPase 14.
   
 0.877
UBE3A
Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates.
   
 0.865
PSMD12
Proteasome 26S subunit, non-ATPase 12.
   
 0.856
DESI1
Desumoylating isopeptidase 1.
    
 
 0.856
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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