STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102346357Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles. (154 aa)    
Predicted Functional Partners:
ADGB
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
   
 
 0.849
CYB5R4
Cytochrome b5 reductase 4.
   
 0.707
LOC102362574
X globin; Belongs to the globin family.
      
 0.673
LOC102346998
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.530
GPR1
G protein-coupled receptor 1.
     
 0.499
GBE1
1,4-alpha-glucan branching enzyme 1.
      
 0.473
PGK1
Phosphoglycerate kinase.
    
 
 0.466
NPRL3
NPR3 like, GATOR1 complex subunit.
   
  
 0.435
LOC102347143
Uncharacterized protein.
   
 
 0.420
CYB5B
Cytochrome b5 type B; Belongs to the cytochrome b5 family.
   
 
 0.414
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.