STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FNDC3AFibronectin type III domain containing 3A. (1198 aa)    
Predicted Functional Partners:
TATDN2
Uncharacterized protein.
      
 0.590
PYY
Peptide YY.
    
 
 0.585
POMC
Proopiomelanocortin.
      
 0.545
GALNT2
Polypeptide N-acetylgalactosaminyltransferase.
   
 
  0.535
AMN
Amnion associated transmembrane protein.
      
 0.502
CCK
Cholecystokinin.
      
 0.433
H3AWX7_LATCH
Crystallin, beta B1, like 3; Belongs to the beta/gamma-crystallin family.
    
  0.426
GHSR
Growth hormone secretagogue receptor; Belongs to the G-protein coupled receptor 1 family.
    
 0.423
CCDC174
Coiled-coil domain containing 174.
   
 
 0.413
ITSN2
Intersectin 2.
   
 
  0.413
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.