STRINGSTRING
FNDC3A protein (Latimeria chalumnae) - STRING interaction network
"FNDC3A" - Fibronectin type III domain containing 3A in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FNDC3AFibronectin type III domain containing 3A (1198 aa)    
Predicted Functional Partners:
CYSLTR2
Cysteinyl leukotriene receptor 2 (344 aa)
           
  0.478
CCDC11
Coiled-coil domain containing 11 (407 aa)
           
  0.456
SMC3
Structural maintenance of chromosomes 3 (1222 aa)
     
      0.448
TMEM138
Transmembrane protein 138 (118 aa)
           
  0.435
HPD
4-hydroxyphenylpyruvate dioxygenase (395 aa)
           
  0.420
TMEM74
Transmembrane protein 74 (270 aa)
           
  0.407
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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