STRINGSTRING
ENSLACG00000001672 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000001672" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000001672Uncharacterized protein (244 aa)    
Predicted Functional Partners:
TRRAP
Transformation/transcription domain-associated protein (2877 aa)
     
  0.932
BRPF1
Bromodomain and PHD finger containing, 1 (1215 aa)
     
  0.931
BRD1
Bromodomain containing 1 (1190 aa)
     
  0.931
BRPF3
Bromodomain and PHD finger containing, 3 (1194 aa)
     
  0.931
ING4
Inhibitor of growth family, member 4 (167 aa)
     
  0.908
ING5
Inhibitor of growth family, member 5 (143 aa)
     
  0.908
EPC1
Enhancer of polycomb homolog 1 (Drosophila) (811 aa)
     
  0.895
EPC2
Enhancer of polycomb homolog 2 (Drosophila) (806 aa)
     
  0.895
MEAF6
MYST/Esa1-associated factor 6 (200 aa)
     
  0.880
ARID4A
AT rich interactive domain 4A (RBP1-like) (1297 aa)
     
  0.864
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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