STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM2CCM2 scaffold protein. (447 aa)    
Predicted Functional Partners:
PDCD10
Programmed cell death 10.
    
 
 0.981
KRIT1
KRIT1 ankyrin repeat containing.
    
 
 0.972
MAP3K3
Mitogen-activated protein kinase kinase kinase 3.
    
 0.917
LOC102350357
Uncharacterized protein.
    
 0.917
ITGB1BP1
Integrin subunit beta 1 binding protein 1.
    
 
 0.817
MAP3K2
Mitogen-activated protein kinase kinase kinase 2.
    
 0.790
EFCAB2
EF-hand calcium binding domain 2.
    
 0.777
MTMR9
Myotubularin related protein 9.
   
 0.769
LOC102351267
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
      
 0.745
SH3BGR
Uncharacterized protein.
   
  
 0.720
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.