Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZBTB22Zinc finger and BTB domain containing 22. (463 aa)    
Predicted Functional Partners:
RPL15
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
      
 0.756
H2ZRN7_LATCH
Metallothionein; Metallothioneins have a high content of cysteine residues that bind various heavy metals.
    
 
 0.657
PRPF39
Pre-mRNA processing factor 39.
      
 0.471
SLC38A8
Solute carrier family 38 member 8.
     
 0.468
TAPBP
Uncharacterized protein.
   
 0.465
PSMD3
Proteasome 26S subunit, non-ATPase 3.
    
  0.464
MVB12B
Multivesicular body subunit 12B.
      
 0.454
RGL2
Uncharacterized protein.
      
 0.436
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.416
DHX35
DEAH-box helicase 35.
   
 0.412
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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