Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
THSD7AThrombospondin type 1 domain containing 7A. (784 aa)    
Predicted Functional Partners:
SBSPON
Somatomedin B and thrombospondin type 1 domain containing.
     
 0.697
KCMF1
Potassium channel modulatory factor 1.
      
 0.641
H3AR28_LATCH
Uncharacterized protein.
      
 0.641
H3B0Z8_LATCH
Uncharacterized protein.
      
 0.627
CDH11
Cadherin 11; Cadherins are calcium-dependent cell adhesion proteins.
   
 
 0.618
TMEM179
Transmembrane protein 179.
      
 0.598
EXT2
Exostosin glycosyltransferase 2; Belongs to the glycosyltransferase 47 family.
      
 0.581
THBS2
Uncharacterized protein.
    
 0.563
ADAMTS18
ADAM metallopeptidase with thrombospondin type 1 motif 18.
     
  0.561
ADAMTS13
ADAM metallopeptidase with thrombospondin type 1 motif 13.
     
 0.556
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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