Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2ZWY0_LATCHUncharacterized protein. (156 aa)    
Predicted Functional Partners:
EFHB
EF-hand domain family member B.
   
   0.832
MNS1
Meiosis specific nuclear structural 1.
    
  0.825
ENKUR
Enkurin, TRPC channel interacting protein.
    
   0.821
FAM183A
Family with sequence similarity 183 member A.
    
   0.821
NME7
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
    
   0.821
LOC102361142
Uncharacterized protein.
    
   0.821
C9orf135
Chromosome 9 open reading frame 135.
    
   0.821
CCDC173
Coiled-coil domain containing 173.
    
  0.821
C9orf116
Chromosome 9 open reading frame 116.
    
   0.821
TEX49
Testis expressed 49.
    
   0.821
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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