STRINGSTRING
ENSLACG00000001700 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000001700" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000001700Uncharacterized protein (504 aa)    
Predicted Functional Partners:
ETF1
Eukaryotic translation termination factor 1 (437 aa)
   
  0.995
PABPC1
Polyadenylate-binding protein 1; Binds the poly(A) tail of mRNA (668 aa)
     
  0.984
PABPC4
poly(A) binding protein, cytoplasmic 4 (inducible form); Binds the poly(A) tail of mRNA (638 aa)
     
  0.953
PABPC1L
poly(A) binding protein, cytoplasmic 1-like; Binds the poly(A) tail of mRNA (639 aa)
     
  0.953
RPS3A
Ribosomal protein S3A (264 aa)
     
  0.941
ENSLACG00000009328
Uncharacterized protein (705 aa)
     
  0.936
RPSA
Ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis (313 aa)
     
  0.931
ENSLACG00000017814
Uncharacterized protein (439 aa)
     
  0.928
EEF1G
Uncharacterized protein (439 aa)
     
  0.928
RPS15
Ribosomal protein S15 (151 aa)
     
  0.922
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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