Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2ZWY5_LATCHUncharacterized protein. (102 aa)    
Predicted Functional Partners:
SNTA1
Syntrophin alpha 1.
   
 0.910
DTNA
Dystrobrevin.
 
      0.900
DTNB
Dystrobrevin, beta b.
 
      0.900
SSPN
Sarcospan.
    
 0.763
SGCZ
Sarcoglycan zeta.
   
 0.744
H3AFZ1_LATCH
Peptidase S72 domain-containing protein.
    
 0.743
DAG1
Dystroglycan 1.
    
 0.743
RSPH3
Radial spoke head 3.
    
   0.732
PPP1R21
Protein phosphatase 1 regulatory subunit 21.
    
   0.732
H3A6Z5_LATCH
PDZ domain-containing protein.
   
 0.724
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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