STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102355101Uncharacterized protein. (690 aa)    
Predicted Functional Partners:
LOC102360209
Uncharacterized protein.
 
      0.879
PROS1
Protein S.
     
 0.778
GAS6
Uncharacterized protein.
    
 0.729
H3B381_LATCH
Uncharacterized protein.
    
 0.540
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.540
UBE2V2-2
Ubiquitin-conjugating enzyme E2 variant 2.
   
  0.537
UBE2V1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
  0.537
ITSN2
Intersectin 2.
   
  0.514
SOCS1
Suppressor of cytokine signaling 1a.
    
 0.495
IFNAR1
Uncharacterized protein.
    
 0.471
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.