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UBXN6 protein (Latimeria chalumnae) - STRING interaction network
"UBXN6" - UBX domain protein 6 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBXN6UBX domain protein 6 (439 aa)    
Predicted Functional Partners:
ENSLACG00000015950
Uncharacterized protein (697 aa)
     
  0.976
VCP
Valosin containing protein (801 aa)
     
  0.976
NSFL1C
NSFL1 (p97) cofactor (p47) (370 aa)
     
  0.910
UBXN2B
UBX domain protein 2B (298 aa)
     
  0.910
SPATA5
Spermatogenesis associated 5 (795 aa)
     
 
  0.887
SPATA5L1
Spermatogenesis associated 5-like 1 (792 aa)
     
 
  0.883
SVIP
Small VCP/p97-interacting protein (80 aa)
         
    0.800
EMC2
ER membrane protein complex subunit 2 (297 aa)
     
      0.674
UBXN7
UBX domain protein 7 (505 aa)
     
 
  0.638
UBXN4
UBX domain protein 4 (528 aa)
     
 
  0.625
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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