STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102361064NTR domain-containing protein. (202 aa)    
Predicted Functional Partners:
MMP9
Matrix metallopeptidase 9.
   
 0.715
ADAM17
ADAM metallopeptidase domain 17.
    
 0.667
MMP16
Matrix metallopeptidase 16.
   
 0.605
H3A2Q1_LATCH
ZnMc domain-containing protein.
   
 0.605
MMP21
Matrix metallopeptidase 21; Belongs to the peptidase M10A family.
   
 0.605
LOC102348367
ZnMc domain-containing protein; Belongs to the peptidase M10A family.
   
 0.605
MMP11
Matrix metallopeptidase 11.
   
 0.605
MMP15
Matrix metallopeptidase 15b.
   
 0.605
H3ARV7_LATCH
ZnMc domain-containing protein; Belongs to the peptidase M10A family.
   
 0.605
MMP19
Matrix metallopeptidase 19.
   
 0.605
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.