STRINGSTRING
PQBP1 protein (Latimeria chalumnae) - STRING interaction network
"PQBP1" - Polyglutamine binding protein 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PQBP1Polyglutamine binding protein 1 (268 aa)    
Predicted Functional Partners:
TXNL4A
Thioredoxin-like 4A (105 aa)
     
  0.908
TXNL4B
Thioredoxin-like 4B (149 aa)
     
  0.850
ENSLACG00000000623
Uncharacterized protein (63 aa)
     
  0.850
CD2BP2
CD2 (cytoplasmic tail) binding protein 2 (297 aa)
     
    0.789
SUGP1
SURP and G patch domain containing 1 (616 aa)
     
    0.763
SF3A2
Splicing factor 3a, subunit 2, 66kDa (313 aa)
     
    0.737
AQR
Aquarius homolog (mouse) (1464 aa)
     
    0.630
YTHDC2
YTH domain containing 2 (1429 aa)
     
 
    0.616
ENSLACG00000009931
Uncharacterized protein (77 aa)
     
      0.611
NDUFA7
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa (127 aa)
       
      0.590
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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