STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PQBP1Polyglutamine binding protein 1. (268 aa)    
Predicted Functional Partners:
H3AVR5_LATCH
Uncharacterized protein.
    
 0.999
TXNL4A
Thioredoxin like 4A.
   
 0.951
TXNL4A-2
Uncharacterized protein.
   
 0.951
CTNNBL1
Catenin beta like 1.
   
 
 0.906
CWC15
CWC15 spliceosome associated protein homolog.
   
 
  0.900
PRPF19
Pre-mRNA processing factor 19.
     
  0.897
PLRG1
Pleiotropic regulator 1.
     
  0.840
CDC5L
Cell division cycle 5 like.
     
  0.840
BCAS2
BCAS2 pre-mRNA processing factor.
     
  0.840
TXNL4B
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
   
 0.839
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.