CHODL protein (Latimeria chalumnae) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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[Homology]

Score

CHODL

Chondrolectin. (286 aa)

Predicted Functional Partners:

TRARG1

0.614

CALB2

0.606

CLEC3B

0.580

LOC102356940

0.548

RPL36AL

0.539

LOC102353415

0.521

GEMIN2

0.497

SNAP47

0.481

LOC102367330

0.477

ZBTB21

0.475

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CALB2	CHODL	ENSLACP00000002679	ENSLACP00000001930	Calbindin 2.	Chondrolectin.	0.606
CHODL	CALB2	ENSLACP00000001930	ENSLACP00000002679	Chondrolectin.	Calbindin 2.	0.606
CHODL	CLEC3B	ENSLACP00000001930	ENSLACP00000013349	Chondrolectin.	C-type lectin domain family 3 member B.	0.580
CHODL	GEMIN2	ENSLACP00000001930	ENSLACP00000005314	Chondrolectin.	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	0.497
CHODL	LOC102353415	ENSLACP00000001930	ENSLACP00000003031	Chondrolectin.	Uncharacterized protein.	0.521
CHODL	LOC102356940	ENSLACP00000001930	ENSLACP00000013721	Chondrolectin.	Xin actin binding repeat containing 1.	0.548
CHODL	LOC102367330	ENSLACP00000001930	ENSLACP00000008657	Chondrolectin.	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	0.477
CHODL	RPL36AL	ENSLACP00000001930	ENSLACP00000019698	Chondrolectin.	Ribosomal protein L36a like; Belongs to the eukaryotic ribosomal protein eL42 family.	0.539
CHODL	SNAP47	ENSLACP00000001930	ENSLACP00000013760	Chondrolectin.	Synaptosome associated protein 47.	0.481
CHODL	TRARG1	ENSLACP00000001930	ENSLACP00000015078	Chondrolectin.	Trafficking regulator of GLUT4 (SLC2A4) 1.	0.614
CHODL	ZBTB21	ENSLACP00000001930	ENSLACP00000014440	Chondrolectin.	Zinc finger and BTB domain containing 21.	0.475
CLEC3B	CHODL	ENSLACP00000013349	ENSLACP00000001930	C-type lectin domain family 3 member B.	Chondrolectin.	0.580
GEMIN2	CHODL	ENSLACP00000005314	ENSLACP00000001930	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family.	Chondrolectin.	0.497
LOC102353415	CHODL	ENSLACP00000003031	ENSLACP00000001930	Uncharacterized protein.	Chondrolectin.	0.521
LOC102356940	CHODL	ENSLACP00000013721	ENSLACP00000001930	Xin actin binding repeat containing 1.	Chondrolectin.	0.548
LOC102367330	CHODL	ENSLACP00000008657	ENSLACP00000001930	Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.	Chondrolectin.	0.477
RPL36AL	CHODL	ENSLACP00000019698	ENSLACP00000001930	Ribosomal protein L36a like; Belongs to the eukaryotic ribosomal protein eL42 family.	Chondrolectin.	0.539
RPL36AL	SNAP47	ENSLACP00000019698	ENSLACP00000013760	Ribosomal protein L36a like; Belongs to the eukaryotic ribosomal protein eL42 family.	Synaptosome associated protein 47.	0.609
RPL36AL	TRARG1	ENSLACP00000019698	ENSLACP00000015078	Ribosomal protein L36a like; Belongs to the eukaryotic ribosomal protein eL42 family.	Trafficking regulator of GLUT4 (SLC2A4) 1.	0.605
RPL36AL	ZBTB21	ENSLACP00000019698	ENSLACP00000014440	Ribosomal protein L36a like; Belongs to the eukaryotic ribosomal protein eL42 family.	Zinc finger and BTB domain containing 21.	0.644