STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP35Ubiquitin carboxyl-terminal hydrolase. (969 aa)    
Predicted Functional Partners:
WDR48
WD repeat domain 48.
    
 0.819
STING1
Uncharacterized protein.
    
   0.690
WDR20
WD repeat domain 20.
   
 0.668
DMWD
DM1 locus, WD repeat containing.
   
 0.668
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.636
INPP4B
Inositol polyphosphate-4-phosphatase type II B.
      
 0.628
HHIP
Hedgehog interacting protein.
      
 0.609
ANAPC10
Anaphase promoting complex subunit 10.
      
 0.608
FANCD2
FA complementation group D2.
    
 0.607
FKBP8
Peptidylprolyl isomerase.
      
 0.594
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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