Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GPBP1GC-rich promoter binding protein 1. (496 aa)    
Predicted Functional Partners:
FNDC11
Fibronectin type III domain containing 11.
    
   0.925
PSMC1
Proteasome 26S subunit, ATPase 1; Belongs to the AAA ATPase family.
      
 0.637
EAPP
E2F associated phosphoprotein.
      
 0.593
CNOT2
CCR4-NOT transcription complex subunit 2.
   
 
 0.592
ND2
NADH-ubiquinone oxidoreductase chain 2; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).
      
 0.592
CYTB
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.
   
  
 0.592
DRG2
Developmentally regulated GTP binding protein 2.
      
 0.587
ZCCHC4
Zinc finger CCHC-type containing 4.
      
 0.567
PCMT1
Protein-L-isoaspartate (D-aspartate) O-methyltransferase.
    
   0.560
CNOT1
CCR4-NOT transcription complex subunit 1.
   
   0.558
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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