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STRINGSTRING
FREM3 protein (Latimeria chalumnae) - STRING interaction network
"FREM3" - Fras1 related extracellular matrix 3 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FREM3Fras1 related extracellular matrix 3 (3131 aa)    
Predicted Functional Partners:
VWA2
Von Willebrand factor A domain containing 2 (763 aa)
     
   
  0.779
HMCN1
Hemicentin 1 (5440 aa)
     
   
  0.651
HMCN2
Hemicentin 2 (5563 aa)
     
   
  0.651
NPNT
Nephronectin (583 aa)
     
 
  0.634
GRIP2
Glutamate receptor interacting protein 2 (1064 aa)
       
 
  0.620
GRIP1
Glutamate receptor interacting protein 1 (938 aa)
       
 
  0.620
SMTNL2
Smoothelin, like (470 aa)
     
 
  0.605
KCTD5
Potassium channel tetramerisation domain containing 5 (232 aa)
           
  0.588
PXDC1
PX domain containing 1 (231 aa)
     
   
  0.555
AJAP1
Adherens junctions associated protein 1 (136 aa)
     
   
  0.550
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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