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FREM3 protein (Latimeria chalumnae) - STRING interaction network
"FREM3" - FRAS1 related extracellular matrix 3 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FREM3FRAS1 related extracellular matrix 3 (3131 aa)    
Predicted Functional Partners:
ENSLACG00000012279
Fraser extracellular matrix complex subunit 1 (630 aa)
 
 
 
  0.820
MIPEP
Mitochondrial intermediate peptidase (698 aa)
       
 
  0.617
VWCE
Von Willebrand factor C and EGF domains (620 aa)
     
 
  0.534
ATP2B2
ATPase, Ca++ transporting, plasma membrane 2; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium (1180 aa)
     
   
  0.505
ATP2B4
ATPase, Ca++ transporting, plasma membrane 4; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium (1233 aa)
     
   
  0.505
ATP2B3
ATPase, Ca++ transporting, plasma membrane 3; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium (1259 aa)
     
   
  0.505
ATP2B1
ATPase, Ca++ transporting, plasma membrane 1; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium (1171 aa)
     
   
  0.505
EGFL6
EGF-like-domain, multiple 6 (526 aa)
           
  0.497
GRIP1
Glutamate receptor interacting protein 1 (938 aa)
     
 
  0.493
EGFLAM
EGF-like, fibronectin type III and laminin G domains (587 aa)
     
 
  0.480
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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