Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FREM3FRAS1 related extracellular matrix 3. (3131 aa)    
Predicted Functional Partners:
FRAS1
Uncharacterized protein.
 
  
 0.898
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.603
LOC102345465
Uncharacterized protein.
   
  0.522
H3AN32_LATCH
Uncharacterized protein.
   
  0.522
GRIP1
Glutamate receptor interacting protein 1.
     
 0.462
DNAJC12
DnaJ heat shock protein family (Hsp40) member C12.
      
 0.437
PROSER1
Proline and serine rich 1.
    
 0.419
CMYA5
Uncharacterized protein.
    
 0.413
NHLRC3
NHL repeat containing 3.
    
 0.412
ASF1B
Anti-silencing function 1B histone chaperone.
    
 0.411
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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