STRINGSTRING
PUS7 protein (Latimeria chalumnae) - STRING interaction network
"PUS7" - Pseudouridylate synthase 7 homolog (S. cerevisiae) in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUS7Pseudouridylate synthase 7 homolog (S. cerevisiae) (667 aa)    
Predicted Functional Partners:
POLR1B
Polymerase (RNA) I polypeptide B, 128kDa; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1135 aa)
   
        0.838
RBM28
RNA binding motif protein 28 (559 aa)
     
        0.792
WDR12
WD repeat domain 12 (339 aa)
     
        0.788
NOC3L
Nucleolar complex associated 3 homolog (S. cerevisiae) (795 aa)
     
      0.778
NSUN6
NOP2/Sun domain family, member 6 (469 aa)
     
 
  0.743
GRWD1
Glutamate-rich WD repeat containing 1 (468 aa)
     
   
  0.741
BRIX1
BRX1, biogenesis of ribosomes, homolog (S. cerevisiae) (345 aa)
     
        0.735
NAT10
N-acetyltransferase 10 (GCN5-related) (1025 aa)
   
   
  0.734
NOL10
Nucleolar protein 10 (690 aa)
     
        0.731
WDR59
WD repeat domain 59 (967 aa)
     
   
  0.730
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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