STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZX25_LATCHANK_REP_REGION domain-containing protein. (269 aa)    
Predicted Functional Partners:
LIAS
Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
     
 0.607
BLOC1S6
Biogenesis of lysosomal organelles complex 1 subunit 6.
    
 0.565
H3B2B0_LATCH
SH3 domain-containing protein.
     
 0.545
RRAD
RRAD, Ras related glycolysis inhibitor and calcium channel regulator.
    
 0.488
SNX18
Sorting nexin.
    
 0.480
NFRKB
Nuclear factor related to kappaB binding protein.
      
 0.470
ARHGAP26
Rho GTPase activating protein 26.
      
 0.454
IFT81
Intraflagellar transport 81.
    
 0.452
LIMA1
LIM domain and actin binding 1.
   
 
 0.444
SH3YL1
SH3 and SYLF domain containing 1.
    
 
 0.432
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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