STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNA10Potassium voltage-gated channel subfamily A member 10; Belongs to the potassium channel family. (515 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.919
RPLP2
Ribosomal protein, large P2; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.906
AP4B1
AP complex subunit beta; Belongs to the adaptor complexes large subunit family.
      
 0.759
RPL23A
Ribosomal protein L23a.
   
 0.749
RPL31
Ribosomal protein L31.
   
 0.749
RPL35
Ribosomal protein L35.
   
 0.749
RPL30
Ribosomal protein L30.
   
 0.747
SLC16A1
Solute carrier family 16 member 1.
      
 0.746
RPL24
Ribosomal protein L24.
   
 0.743
RPL35A
Ribosomal protein L35a.
   
 0.742
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.