STRINGSTRING
LCMT2 protein (Latimeria chalumnae) - STRING interaction network
"LCMT2" - Leucine carboxyl methyltransferase 2 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCMT2Leucine carboxyl methyltransferase 2 (689 aa)    
Predicted Functional Partners:
FKBPL
FK506 binding protein like (269 aa)
           
  0.660
GDA
Guanine deaminase (411 aa)
       
      0.590
MSN
Moesin (583 aa)
           
  0.550
TYW3
tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) (257 aa)
     
   
  0.540
TYW1
tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) (759 aa)
     
   
  0.534
PPP2R2A
Protein phosphatase 2, regulatory subunit B, alpha (451 aa)
     
 
  0.500
PPP2R2D
Protein phosphatase 2, regulatory subunit B, delta (447 aa)
     
 
  0.500
PPP2R2C
Protein phosphatase 2, regulatory subunit B, gamma (447 aa)
     
 
  0.500
PPP2R2B
Protein phosphatase 2, regulatory subunit B, beta (432 aa)
     
 
  0.500
PPP6C
Protein phosphatase 6, catalytic subunit (305 aa)
     
 
  0.481
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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