STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102366946Uncharacterized protein. (358 aa)    
Predicted Functional Partners:
CEP120
Centrosomal protein 120.
 
     0.935
SPICE1
Spindle and centriole associated protein 1.
    
 
 0.567
ARID4A
AT-rich interaction domain 4A.
   
 0.509
PLK4
Polo like kinase 4.
    
 0.494
CEP290
Centrosomal protein 290.
   
 0.483
CEP164
Centrosomal protein 164.
   
 0.476
H3B606_LATCH
Neuralized E3 ubiquitin protein ligase 4.
    
 0.465
H3BHU9_LATCH
Uncharacterized protein.
    
 0.464
WDR90
WD repeat domain 90.
   
  0.454
H3B175_LATCH
TACC_C domain-containing protein.
    
 0.438
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.