STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102366946Uncharacterized protein. (358 aa)    
Predicted Functional Partners:
CEP120
Centrosomal protein 120.
 
     0.935
C9orf78
Chromosome 9 open reading frame 78.
    
   0.727
RRBP1
Ribosome binding protein 1.
   
  0.723
SPICE1
Spindle and centriole associated protein 1.
   
 
 0.675
POC5
POC5 centriolar protein homolog (Chlamydomonas).
   
 
 0.641
CEP164
Centrosomal protein 164.
   
 0.640
CEP63
Centrosomal protein 63.
   
 
 0.632
H3B606_LATCH
Neuralized E3 ubiquitin protein ligase 4.
    
 0.629
H3BHU9_LATCH
Uncharacterized protein.
    
 0.627
TCTEX1D2
Tctex1 domain containing 2.
    
 
 0.613
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.