STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BMERB1BMERB domain containing 1. (142 aa)    
Predicted Functional Partners:
DCTN1
Dynactin 1a.
    
   0.922
DCTN4
Dynactin subunit 4.
    
   0.919
DCTN6
Dynactin subunit 6.
    
   0.821
MARF1
Meiosis regulator and mRNA stability factor 1.
      
 0.791
ACTR10
Actin related protein 10; Belongs to the actin family.
    
   0.759
ACTR1A
Actin related protein 1A.
    
   0.685
LOC102363490
Uncharacterized protein.
    
   0.685
RAPGEF4
Rap guanine nucleotide exchange factor 4.
    
   0.609
MAP7D2
MAP7 domain containing 2.
      
 0.594
SDHB
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
      
 0.593
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.