STRINGSTRING
PALB2 protein (Latimeria chalumnae) - STRING interaction network
"PALB2" - Partner and localizer of BRCA2 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PALB2Partner and localizer of BRCA2 (874 aa)    
Predicted Functional Partners:
BRCA2
Breast cancer 2, early onset (1245 aa)
     
  0.993
BRIP1
BRCA1 interacting protein C-terminal helicase 1 (716 aa)
     
  0.963
RAD51C
RAD51 homolog C (S. cerevisiae) (368 aa)
     
  0.959
RAD51
RAD51 homolog (S. cerevisiae) (341 aa)
     
  0.704
EME1
Essential meiotic endonuclease 1 homolog 1 (S. pombe) (609 aa)
     
 
  0.694
ATM
Ataxia telangiectasia mutated (2375 aa)
     
 
  0.693
XRCC2
X-ray repair complementing defective repair in Chinese hamster cells 2 (282 aa)
         
  0.689
ENSLACG00000013489
Uncharacterized protein (1393 aa)
         
  0.685
XRCC3
X-ray repair complementing defective repair in Chinese hamster cells 3 (358 aa)
     
  0.684
FANCD2
Fanconi anemia, complementation group D2 (1462 aa)
     
 
  0.666
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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