Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC102346204Protein kinase domain-containing protein. (227 aa)    
Predicted Functional Partners:
STK3
Serine/threonine kinase 3.
 
   
  0.989
SAV1
Salvador family WW domain containing protein 1.
    
 0.968
CASP3
Caspase 3; Belongs to the peptidase C14A family.
   
 0.964
LOC102350996
MOB kinase activator 1A.
    
 0.930
MOB1B
MOB kinase activator 1B.
    
 0.923
LATS2
Large tumor suppressor kinase 2.
    
 0.919
LATS1
Large tumor suppressor kinase 1.
    
 0.910
STK4
Serine/threonine kinase 4.
  
  
 
0.900
RASSF5
Ras association domain family member 5.
    
 0.872
RASSF1
Ras association domain family member 1.
    
 0.845
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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