STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSME4Proteasome activator subunit 4. (1848 aa)    
Predicted Functional Partners:
PSMA2
Proteasome subunit alpha type.
    
 0.999
PSMA3
Proteasome subunit alpha type.
    
 0.995
PSMB2
Proteasome subunit beta.
    
 0.990
PSMA5
Proteasome subunit alpha type.
    
 0.986
PSMA4
Proteasome subunit alpha type.
    
 0.984
PSMB4
Proteasome subunit beta; Belongs to the peptidase T1B family.
    
 0.973
UBXN7
UBX domain-containing protein 7.
   
 
  0.966
PSMB3
Proteasome subunit beta 3.
    
 0.961
PSMB6
Proteasome subunit beta.
    
 0.954
PSMB9
Proteasome subunit beta.
    
 0.951
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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