STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PATJPATJ crumbs cell polarity complex component. (2073 aa)    
Predicted Functional Partners:
MPP5
Membrane palmitoylated protein 5; Belongs to the MAGUK family.
    
 0.833
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.623
MPP7
Membrane palmitoylated protein 7; Belongs to the MAGUK family.
    
 0.605
MPP3
Membrane palmitoylated protein 3; Belongs to the MAGUK family.
    
 0.605
IFT57
Intraflagellar transport 57.
    
 0.599
TRAF3IP1
TRAF3 interacting protein 1.
    
 0.578
PLCB4
Phosphoinositide phospholipase C.
   
   0.576
LLGL1
LLGL scribble cell polarity complex component 1.
    
 
 0.566
IFT80
Intraflagellar transport 80.
    
 0.565
ANKLE2
Ankyrin repeat and LEM domain containing 2.
    
 
 0.560
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.