STRINGSTRING
DNTT protein (Latimeria chalumnae) - STRING interaction network
"DNTT" - Deoxynucleotidyltransferase, terminal in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNTTDeoxynucleotidyltransferase, terminal (487 aa)    
Predicted Functional Partners:
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (260 aa)
     
  0.859
LIG4
Ligase IV, DNA, ATP-dependent (911 aa)
     
  0.810
APTX
Aprataxin (372 aa)
     
  0.809
XRCC6
X-ray repair complementing defective repair in Chinese hamster cells 6 (610 aa)
     
  0.733
XRCC5
X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) (606 aa)
     
 
  0.669
PNKP
Polynucleotide kinase 3’-phosphatase (611 aa)
     
  0.659
LIG3
Ligase III, DNA, ATP-dependent (960 aa)
     
  0.651
ENSLACG00000000574
Uncharacterized protein (108 aa)
     
  0.651
XRCC4
X-ray repair complementing defective repair in Chinese hamster cells 4 (331 aa)
     
 
  0.644
ENSLACG00000009690
Uncharacterized protein (206 aa)
     
  0.629
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
Server load: low (7%) [HD]