STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX8DEAH-box helicase 8. (1211 aa)    
Predicted Functional Partners:
PRPF3
Pre-mRNA processing factor 3.
   
 
 0.980
SLU7
SLU7 homolog, splicing factor.
   
 0.967
CDC40
Cell division cycle 40.
   
 0.962
SYF2
SYF2 pre-mRNA splicing factor.
    
 0.946
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
 0.943
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.937
AQR
Aquarius intron-binding spliceosomal factor.
   
 0.934
SNW1
SNW domain containing 1.
   
 0.923
XAB2
XPA binding protein 2.
   
 0.914
PRPF18
PRP18 pre-mRNA processing factor 18 homolog (yeast).
   
 0.903
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.