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ENSLACG00000001779 protein (Latimeria chalumnae) - STRING interaction network
"ENSLACG00000001779" - Nucleophosmin 1b (nucleolar phosphoprotein B23, numatrin) in Latimeria chalumnae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLACG00000001779Nucleophosmin 1b (nucleolar phosphoprotein B23, numatrin); Nucleophosmin/nucleoplasmin, 1b (327 aa)    
Predicted Functional Partners:
ENSLACG00000022167
Uncharacterized protein; Nucleolin (470 aa)
     
 
  0.871
ENSLACG00000009328
Nucleolin (705 aa)
     
 
  0.871
NAP1L1
Nucleosome assembly protein 1, like 1; Belongs to the nucleosome assembly protein (NAP) family (401 aa)
     
 
  0.845
TP53
Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family (401 aa)
     
 
  0.755
NAP1L4
Nucleosome assembly protein 1-like 4b; Belongs to the nucleosome assembly protein (NAP) family (410 aa)
     
 
  0.698
ENSLACG00000002554
SUMO1/sentrin/SMT3 specific peptidase 3b (462 aa)
     
 
  0.695
SET
Uncharacterized protein; SET translocation (myeloid leukemia-associated) B; Belongs to the nucleosome assembly protein (NAP) family (180 aa)
     
   
  0.679
SENP5
SUMO1/sentrin specific peptidase 5 (764 aa)
     
 
  0.665
ENSLACG00000014561
Fibrillarin (343 aa)
     
 
  0.638
RPL5
Ribosomal protein L5 (296 aa)
     
 
  0.604
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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