STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXO47F-box protein 47. (451 aa)    
Predicted Functional Partners:
SPO11
SPO11 initiator of meiotic double stranded breaks.
   
  
 0.693
FBXO48
F-box protein 48.
      
 0.686
PRR12
Proline rich 12.
      
 0.672
C1orf109
Chromosome 1 open reading frame 109.
   
    0.606
M1AP
Meiosis 1 associated protein.
   
  
 0.581
CPT1A
Carnitine palmitoyltransferase 1A; Belongs to the carnitine/choline acetyltransferase family.
      
 0.580
H2ZUX7_LATCH
DH domain-containing protein.
      
 0.555
FBXO42
F-box protein 42.
      
 0.555
CALHM6
Calcium homeostasis modulator family member 6.
   
    0.533
CALHM5
Calcium homeostasis modulator family member 5.
   
    0.533
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.