Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANKDD1AAnkyrin repeat and death domain containing 1A. (178 aa)    
Predicted Functional Partners:
DRC7
Dynein regulatory complex subunit 7.
    
 
 0.623
SOWAHD
Sosondowah ankyrin repeat domain family member D.
      
 0.615
TAGAP
T cell activation RhoGTPase activating protein.
      
 0.587
SH3BP4
SH3 domain binding protein 4.
      
 0.547
SHE
Src homology 2 domain containing E.
      
 0.470
ARHGAP29
Rho GTPase activating protein 29.
     
 0.457
ARHGAP45
Rho GTPase activating protein 45.
     
 0.457
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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