STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYLPFMyosin light chain, phosphorylatable, fast skeletal muscle. (205 aa)    
Predicted Functional Partners:
TNNI2
Troponin I2, fast skeletal type.
   
 0.986
MYL1
Myosin light chain 1.
   
 0.974
LOC102361066
EF-hand domain-containing protein.
   
 0.966
H3BH85_LATCH
Uncharacterized protein.
   
 0.959
LOC102352170
Uncharacterized protein.
   
 0.959
MYOZ1
Myozenin 1.
   
  
 0.958
LOC102347576
SH3 domain-containing protein.
   
 
 0.893
H3AYN1_LATCH
Uncharacterized protein.
   
  
 0.836
TNNT3
Troponin T3, fast skeletal type.
   
 0.799
TPM1
Alpha-tropomyosin; Belongs to the tropomyosin family.
   
 0.787
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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