Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF152Ring finger protein 152. (203 aa)    
Predicted Functional Partners:
RRAGB
Ras-related GTP binding A.
    
 0.987
DNAJC11
DnaJ heat shock protein family (Hsp40) member C11.
      
 0.796
TMEM251
Transmembrane protein 251.
      
 0.742
UBE2N
Ubiquitin-conjugating enzyme E2Na; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.732
RPS27A
Ribosomal protein S27a.
    
  0.701
ZNF507
Zinc finger protein 507.
    
 0.657
INTS5
Integrator complex subunit 5.
      
 0.655
ATP6V0B
ATPase H+ transporting V0 subunit b; Belongs to the V-ATPase proteolipid subunit family.
    
 
 0.654
GNPTG
N-acetylglucosamine-1-phosphate transferase subunit gamma.
      
 0.652
IRAK1
Interleukin 1 receptor associated kinase 1.
    
  0.650
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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