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STRINGSTRING
RNF152 protein (Latimeria chalumnae) - STRING interaction network
"RNF152" - Ring finger protein 152 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF152Ring finger protein 152 (203 aa)    
Predicted Functional Partners:
ENSLACG00000016067
Ras-related GTP binding A (313 aa)
       
  0.959
AVL9
AVL9 cell migration associated; AVL9 homolog (S. cerevisiase) (651 aa)
           
  0.841
KBTBD2
Kelch repeat and BTB (POZ) domain containing 2 (623 aa)
       
 
  0.805
TNRC18
Trinucleotide repeat containing 18 (2784 aa)
     
 
  0.757
ZNF507
Zinc finger protein 507 (976 aa)
     
 
  0.689
GET4
Golgi to ER traffic protein 4 homolog (S. cerevisiae) (326 aa)
           
  0.671
INTS5
Integrator complex subunit 5 (945 aa)
     
   
  0.659
RNF144A
Ring finger protein 144A (303 aa)
       
 
  0.658
RNF185
Ring finger protein 185 (195 aa)
     
   
  0.657
ENSLACG00000001490
annotation not available (1087 aa)
     
 
  0.654
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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