STRINGSTRING
ADGB protein (Latimeria chalumnae) - STRING interaction network
"ADGB" - Androglobin in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADGBAndroglobin (541 aa)    
Predicted Functional Partners:
PTPN23
Protein tyrosine phosphatase, non-receptor type 23 (1414 aa)
     
  0.609
CHMP4C
Charged multivesicular body protein 4C (240 aa)
     
 
  0.595
CHMP4B
Charged multivesicular body protein 4B (225 aa)
     
 
  0.595
CHMP4A
Charged multivesicular body protein 4A (221 aa)
     
 
  0.595
GCA
Grancalcin, EF-hand calcium binding protein (166 aa)
       
  0.568
PEF1
penta-EF-hand domain containing 1 (263 aa)
       
  0.568
PDCD6
Programmed cell death 6 (121 aa)
       
  0.568
CAPNS1
Calpain, small subunit 1 (269 aa)
       
  0.568
SRI
Sorcin (201 aa)
       
  0.568
RHPN1
Rhophilin, Rho GTPase binding protein 1 (606 aa)
     
 
  0.522
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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