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STRINGSTRING
ADGB protein (Latimeria chalumnae) - STRING interaction network
"ADGB" - Uncharacterized protein in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADGBUncharacterized protein; Androglobin; Belongs to the peptidase C2 family (541 aa)    
Predicted Functional Partners:
CAST
Uncharacterized protein; Calpastatin (667 aa)
       
 
  0.885
ENSLACG00000003954
Uncharacterized protein; X globin; Belongs to the globin family (144 aa)
           
  0.772
CYGB
Cytoglobin; Belongs to the globin family (179 aa)
           
  0.765
SRI
Sorcin (201 aa)
       
 
  0.578
GCA
Grancalcin, EF-hand calcium binding protein (166 aa)
       
 
  0.562
CASP3
Caspase 3, apoptosis-related cysteine protease a; Belongs to the peptidase C14A family (290 aa)
       
 
  0.554
HIVEP3
Human immunodeficiency virus type I enhancer binding protein 3 (2419 aa)
     
 
  0.524
CTSB
Cathepsin B; Belongs to the peptidase C1 family (344 aa)
           
  0.521
CAPNS1
Calpain, small subunit 1 b (269 aa)
       
 
  0.513
SNRPC
U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5’ splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5’ splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5’ splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5’ end of the U1 snRNA and the 5’ splice-site region; Belongs to the U1 [...] (184 aa)
           
  0.495
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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