STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRRProtein tyrosine phosphatase receptor type R. (330 aa)    
Predicted Functional Partners:
LOC102354262
Mitogen-activated protein kinase.
    
 0.966
MAPK1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.966
MAPK14
Mitogen-activated protein kinase.
    
 0.962
MAPK11
Mitogen-activated protein kinase.
    
 0.962
MAPK12
Uncharacterized protein.
    
 0.961
PTPN5
Protein tyrosine phosphatase non-receptor type 5.
  
  
0.934
DUSP3
Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
   
 0.909
PTPN7
Protein tyrosine phosphatase non-receptor type 7.
  
  
0.906
MAPK9
Mitogen-activated protein kinase.
     
  0.900
MAPK10
Mitogen-activated protein kinase 10.
     
  0.900
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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