Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLT8D1Glycosyltransferase 8 domain containing 1. (374 aa)    
Predicted Functional Partners:
SH3TC1
SH3 domain and tetratricopeptide repeats 1.
      
 0.833
FIG4
FIG4 phosphoinositide 5-phosphatase.
      
 0.682
DNAJC7
DnaJ heat shock protein family (Hsp40) member C7.
      
 0.641
ALS2
Alsin Rho guanine nucleotide exchange factor ALS2.
      
 0.641
GLE1
GLE1 RNA export mediator.
      
 0.641
SFMBT1
Scm like with four mbt domains 1.
      
 0.637
OGFOD2
2-oxoglutarate and iron dependent oxygenase domain containing 2.
      
 0.629
ERLIN1
ER lipid raft associated 1.
   
  
 0.604
ERLIN2
ER lipid raft associated 2.
   
  
 0.604
SIGMAR1
Sigma non-opioid intracellular receptor 1.
      
 0.603
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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