STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZX94_LATCHDehydrogenase/reductase (SDR family) member 12. (325 aa)    
Predicted Functional Partners:
AKR1B1
Aldo-keto reductase family 1, member B1 (aldose reductase), tandem duplicate 1.
   
 
 0.700
FAXDC2
Fatty acid hydroxylase domain containing 2; Belongs to the sterol desaturase family.
   
  
 0.607
OXSM
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.524
RLBP1
Retinaldehyde binding protein 1a.
    
 0.510
TFAP2E
Transcription factor AP-2 epsilon.
    
 0.509
RBP2
Retinol binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
 
 0.503
LOC102350759
SEC14-like lipid binding 8.
    
 0.492
FDX2
Ferredoxin 2.
   
 0.459
H3B695_LATCH
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.459
MCAT
Malonyl-CoA-acyl carrier protein transacylase.
  
 
 0.459
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.