STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HABP2Hyaluronan binding protein 2. (480 aa)    
Predicted Functional Partners:
WDR90
WD repeat domain 90.
   
 0.913
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.831
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.821
SERPINE3
Serpin family E member 3; Belongs to the serpin family.
   
 0.801
SERPINI1
Serpin family I member 1; Belongs to the serpin family.
   
 0.727
RNASEL
Uncharacterized protein.
   
 0.723
RIPK4
Receptor interacting serine/threonine kinase 4.
   
 0.719
SERPINE2
Serpin family E member 2; Belongs to the serpin family.
   
 0.699
SERPINF2
Serpin family F member 2; Belongs to the serpin family.
   
 0.656
LRIT3
Leucine rich repeat, Ig-like and transmembrane domains 3.
    
  0.630
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.